IL_8PV4_082

3D structure

PDB id

8PV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGG*CGGUUAAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8PV4|1|C1|G|1932
8PV4|1|C1|G|1933
8PV4|1|C1|G|1934
*
8PV4|1|C1|C|2050
8PV4|1|C1|G|2051
8PV4|1|C1|G|2052
8PV4|1|C1|U|2053
8PV4|1|C1|U|2054
8PV4|1|C1|A|2055
8PV4|1|C1|A|2056
8PV4|1|C1|C|2057

Current chains

Chain C1

26S rRNA

Nearby chains

Chain Ce

Ribosome biogenesis protein NOP53

Chain LR

Ribosomal protein L19