IL_8PV4_112
3D structure
- PDB id
- 8PV4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- G(OMC)UCU*AACGAGC
- Length
- 12 nucleotides
- Bulged bases
- 8PV4|1|C1|G|2902, 8PV4|1|C1|A|2905
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8PV4|1|C1|G|2837
8PV4|1|C1|OMC|2838
8PV4|1|C1|U|2839
8PV4|1|C1|C|2840
8PV4|1|C1|U|2841
*
8PV4|1|C1|A|2899
8PV4|1|C1|A|2900
8PV4|1|C1|C|2901
8PV4|1|C1|G|2902
8PV4|1|C1|A|2905
8PV4|1|C1|G|2906
8PV4|1|C1|C|2907
Current chains
- Chain C1
- 26S rRNA
Nearby chains
- Chain CH
- Nucleolar GTP-binding protein 1
- Chain LB
- 60S ribosomal protein L3-like protein
- Chain LC
- 60S ribosomal protein L4-like protein
- Chain LO
- 60S ribosomal protein L16-like protein
- Chain LV
- 60S ribosomal protein l23-like protein
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