IL_8Q5I_003
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- CUCAGUAG*UGAAGCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_003 not in the Motif Atlas
- Homologous match to IL_8C3A_006
- Geometric discrepancy: 0.0483
- The information below is about IL_8C3A_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_88613.1
- Basepair signature
- cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8Q5I|1|1|C|81
8Q5I|1|1|U|82
8Q5I|1|1|C|83
8Q5I|1|1|A|84
8Q5I|1|1|G|85
8Q5I|1|1|U|86
8Q5I|1|1|A|87
8Q5I|1|1|G|88
*
8Q5I|1|1|U|96
8Q5I|1|1|G|97
8Q5I|1|1|A|98
8Q5I|1|1|A|99
8Q5I|1|1|G|100
8Q5I|1|1|C|101
8Q5I|1|1|G|102
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AB
- 60S ribosomal protein L28
- Chain t
- 60S ribosomal protein L13
- Chain v
- 60S ribosomal protein L15-A
- Chain y
- 60S ribosomal protein L18-A
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