IL_8Q5I_069
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- UUAAC*GGAAGA
- Length
- 11 nucleotides
- Bulged bases
- 8Q5I|1|1|G|1747
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_069 not in the Motif Atlas
- Homologous match to IL_8C3A_077
- Geometric discrepancy: 0.058
- The information below is about IL_8C3A_077
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_69313.1
- Basepair signature
- cWW-tWH-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8Q5I|1|1|U|1690
8Q5I|1|1|U|1691
8Q5I|1|1|A|1692
8Q5I|1|1|A|1693
8Q5I|1|1|C|1694
*
8Q5I|1|1|G|1743
8Q5I|1|1|G|1744
8Q5I|1|1|A|1745
8Q5I|1|1|A|1746
8Q5I|1|1|G|1747
8Q5I|1|1|A|1748
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain AH
- 60S ribosomal protein L34-B
- Chain AL
- 60S ribosomal protein L38
Coloring options: