IL_8Q5I_144
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- UCAAA*UGACAA
- Length
- 11 nucleotides
- Bulged bases
- 8Q5I|1|A|A|466
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_144 not in the Motif Atlas
- Geometric match to IL_4V88_386
- Geometric discrepancy: 0.1075
- The information below is about IL_4V88_386
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_37842.2
- Basepair signature
- cWW-cWW-L-R-cWW-cWW-R-L
- Number of instances in this motif group
- 4
Unit IDs
8Q5I|1|A|U|37
8Q5I|1|A|C|38
8Q5I|1|A|A|39
8Q5I|1|A|A|40
8Q5I|1|A|A|41
*
8Q5I|1|A|U|464
8Q5I|1|A|G|465
8Q5I|1|A|A|466
8Q5I|1|A|C|467
8Q5I|1|A|A|468
8Q5I|1|A|A|469
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein S4
- Chain K
- Ribosomal protein S4
- Chain Z
- 40S ribosomal protein S24
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