IL_8Q5I_207
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- CUACU*AGAG
- Length
- 9 nucleotides
- Bulged bases
- 8Q5I|1|A|U|1325
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_207 not in the Motif Atlas
- Homologous match to IL_8C3A_461
- Geometric discrepancy: 0.1001
- The information below is about IL_8C3A_461
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_13404.1
- Basepair signature
- cWW-tSH-tHW-cSH-tHH-cWH-L-R-cWW-L-L-R
- Number of instances in this motif group
- 10
Unit IDs
8Q5I|1|A|C|1324
8Q5I|1|A|U|1325
8Q5I|1|A|A|1326
8Q5I|1|A|C|1327
8Q5I|1|A|U|1328
*
8Q5I|1|A|A|1368
8Q5I|1|A|G|1369
8Q5I|1|A|A|1370
8Q5I|1|A|G|1371
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain R
- 40S ribosomal protein S16
- Chain S
- 40S ribosomal protein S17-B
- Chain V
- Ribosomal protein S10
Coloring options: