IL_8Q5I_209
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- CUA*UGGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_209 not in the Motif Atlas
- Homologous match to IL_8C3A_465
- Geometric discrepancy: 0.0809
- The information below is about IL_8C3A_465
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76236.1
- Basepair signature
- cWW-tWH-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
8Q5I|1|A|C|1375
8Q5I|1|A|U|1376
8Q5I|1|A|A|1377
*
8Q5I|1|A|U|1393
8Q5I|1|A|G|1394
8Q5I|1|A|G|1395
8Q5I|1|A|A|1396
8Q5I|1|A|A|1397
8Q5I|1|A|G|1398
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain G
- Ribosomal protein S7
- Chain R
- 40S ribosomal protein S16
- Chain S
- 40S ribosomal protein S17-B
Coloring options: