IL_8Q5I_224
3D structure
- PDB id
- 8Q5I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cephaeline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.45 Å
Loop
- Sequence
- CGGAU*AGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8Q5I_224 not in the Motif Atlas
- Geometric match to IL_4V88_474
- Geometric discrepancy: 0.1234
- The information below is about IL_4V88_474
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_95716.2
- Basepair signature
- cWW-cWW-tHS-tHS-tSH-cWW
- Number of instances in this motif group
- 18
Unit IDs
8Q5I|1|A|C|1665
8Q5I|1|A|G|1666
8Q5I|1|A|G|1667
8Q5I|1|A|A|1668
8Q5I|1|A|U|1669
*
8Q5I|1|A|A|1706
8Q5I|1|A|G|1707
8Q5I|1|A|A|1708
8Q5I|1|A|A|1709
8Q5I|1|A|G|1710
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain 7
- 60S ribosomal protein L24-A
- Chain H
- 40S ribosomal protein S6
- Chain J
- 40S ribosomal protein S8
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