IL_8QCQ_126
3D structure
- PDB id
- 8QCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- B. subtilis ApdA-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- UAGUU*AAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QCQ_126 not in the Motif Atlas
- Homologous match to IL_6CZR_124
- Geometric discrepancy: 0.4613
- The information below is about IL_6CZR_124
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38684.1
- Basepair signature
- cWW-L-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8QCQ|1|a|U|257
8QCQ|1|a|A|258
8QCQ|1|a|G|259
8QCQ|1|a|U|260
8QCQ|1|a|U|261
*
8QCQ|1|a|A|281
8QCQ|1|a|A|282
8QCQ|1|a|G|283
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain q
- 30S ribosomal protein S17
Coloring options: