IL_8QCQ_143

3D structure

PDB id

8QCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

B. subtilis ApdA-stalled ribosomal complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

GUGAAAGCCC*GGAGGGUC

Length

18 nucleotides

Bulged bases

8QCQ|1|a|U|642

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QCQ|1|a|G|613
8QCQ|1|a|U|614
8QCQ|1|a|G|615
8QCQ|1|a|A|616
8QCQ|1|a|A|617
8QCQ|1|a|A|618
8QCQ|1|a|G|619
8QCQ|1|a|C|620
8QCQ|1|a|C|621
8QCQ|1|a|C|622
*
8QCQ|1|a|G|636
8QCQ|1|a|G|637
8QCQ|1|a|A|638
8QCQ|1|a|G|639
8QCQ|1|a|G|640
8QCQ|1|a|G|641
8QCQ|1|a|U|642
8QCQ|1|a|C|643

Current chains

Chain a

16S rRNA

Nearby chains

Chain h

30S ribosomal protein S8

Chain q

30S ribosomal protein S17