IL_8QCQ_174
3D structure
- PDB id
- 8QCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- B. subtilis ApdA-stalled ribosomal complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.3 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QCQ_174 not in the Motif Atlas
- Geometric match to IL_3GM7_005
- Geometric discrepancy: 0.1528
- The information below is about IL_3GM7_005
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
8QCQ|1|a|G|1414
8QCQ|1|a|U|1415
8QCQ|1|a|C|1416
*
8QCQ|1|a|G|1504
8QCQ|1|a|U|1505
8QCQ|1|a|C|1506
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain 8
- mRNA
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- 30S ribosomal protein S12
- Chain w
- Transfer RNA; tRNA
- Chain y
- Transfer RNA; tRNA
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