IL_8QK7_087

3D structure

PDB id

8QK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UAA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

GUGUAGGAUAGG*CCC

Length

15 nucleotides

Bulged bases

8QK7|1|1|U|2111, 8QK7|1|1|A|2114, 8QK7|1|1|G|2115, 8QK7|1|1|U|2118, 8QK7|1|1|A|2119

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QK7_087 not in the Motif Atlas

Geometric match to IL_4V88_406

Geometric discrepancy: 0.3348

The information below is about IL_4V88_406

Detailed Annotation

Isolated near basepair

Broad Annotation

Isolated near basepair

Motif group

IL_76004.2

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

18

Unit IDs

8QK7|1|1|G|2110
8QK7|1|1|U|2111
8QK7|1|1|G|2112
8QK7|1|1|U|2113
8QK7|1|1|A|2114
8QK7|1|1|G|2115
8QK7|1|1|G|2116
8QK7|1|1|A|2117
8QK7|1|1|U|2118
8QK7|1|1|A|2119
8QK7|1|1|G|2120
8QK7|1|1|G|2121
*
8QK7|1|1|C|2177
8QK7|1|1|C|2178
8QK7|1|1|C|2179

Current chains

Chain 1

23S rRNA

Nearby chains