IL_8QK7_171

3D structure

PDB id

8QK7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E167K RF2 on E. coli 70S release complex with UAA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.77 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

8QK7|1|2|C|1400, 8QK7|1|2|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QK7_171 not in the Motif Atlas

Homologous match to IL_5J7L_058

Geometric discrepancy: 0.0827

The information below is about IL_5J7L_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.4

Basepair signature

cWW-L-cWW

Number of instances in this motif group

4

Unit IDs

8QK7|1|2|C|1399
8QK7|1|2|C|1400
8QK7|1|2|G|1401
*
8QK7|1|2|C|1501
8QK7|1|2|A|1502
8QK7|1|2|A|1503
8QK7|1|2|G|1504

Current chains

Chain 2

16S rRNA

Nearby chains

Chain 4

mRNA

Chain 5

Transfer RNA; tRNA

Chain 6

Peptide chain release factor RF2