IL_8QPP_012

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAC*GUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: AAC,GUU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QPP_012 not in the Motif Atlas

Geometric match to IL_4KR9_001

Geometric discrepancy: 0.2477

The information below is about IL_4KR9_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

8QPP|1|A|A|189
8QPP|1|A|A|190
8QPP|1|A|C|191
*
8QPP|1|A|G|198
8QPP|1|A|U|199
8QPP|1|A|U|200

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain Q

30S ribosomal protein S17