IL_8QPP_054
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AACAAAG*CACAAAU
- Length
- 14 nucleotides
- Bulged bases
- 8QPP|1|A|C|1295
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QPP_054 not in the Motif Atlas
- Homologous match to IL_5J7L_054
- Geometric discrepancy: 0.4682
- The information below is about IL_5J7L_054
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_09129.2
- Basepair signature
- cWW-L-R-tWH-L-R-L-tWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8QPP|1|A|A|1256
8QPP|1|A|A|1257
8QPP|1|A|C|1258
8QPP|1|A|A|1259
8QPP|1|A|A|1260
8QPP|1|A|A|1261
8QPP|1|A|G|1262
*
8QPP|1|A|C|1293
8QPP|1|A|A|1294
8QPP|1|A|C|1295
8QPP|1|A|A|1296
8QPP|1|A|A|1297
8QPP|1|A|A|1298
8QPP|1|A|U|1299
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain G
- 30S ribosomal protein S7
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14 type Z
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