IL_8QPP_055
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GCAG*CCAAUC
- Length
- 10 nucleotides
- Bulged bases
- 8QPP|1|A|A|1266, 8QPP|1|A|A|1289, 8QPP|1|A|U|1290
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QPP_055 not in the Motif Atlas
- Homologous match to IL_4LFB_052
- Geometric discrepancy: 0.2153
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_08849.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
8QPP|1|A|G|1264
8QPP|1|A|C|1265
8QPP|1|A|A|1266
8QPP|1|A|G|1267
*
8QPP|1|A|C|1286
8QPP|1|A|C|1287
8QPP|1|A|A|1288
8QPP|1|A|A|1289
8QPP|1|A|U|1290
8QPP|1|A|C|1291
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14 type Z
Coloring options: