IL_8QPP_092
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8QPP|1|X|G|823, 8QPP|1|X|A|835, 8QPP|1|X|A|836
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QPP_092 not in the Motif Atlas
- Homologous match to IL_5J7L_265
- Geometric discrepancy: 0.102
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8QPP|1|X|G|822
8QPP|1|X|G|823
8QPP|1|X|G|824
*
8QPP|1|X|C|834
8QPP|1|X|A|835
8QPP|1|X|A|836
8QPP|1|X|U|837
8QPP|1|X|C|838
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL34
- Chain Z
- Large ribosomal subunit protein uL2
- Chain b
- Large ribosomal subunit protein uL4
- Chain r
- Large ribosomal subunit protein uL22
Coloring options: