IL_8QPP_125
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GGAG*CACAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QPP_125 not in the Motif Atlas
- Geometric match to IL_8B0X_115
- Geometric discrepancy: 0.2694
- The information below is about IL_8B0X_115
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28284.1
- Basepair signature
- cWW-cWW-tWW-cWW
- Number of instances in this motif group
- 3
Unit IDs
8QPP|1|X|G|1478
8QPP|1|X|G|1479
8QPP|1|X|A|1480
8QPP|1|X|G|1481
*
8QPP|1|X|C|1605
8QPP|1|X|A|1606
8QPP|1|X|C|1607
8QPP|1|X|A|1608
8QPP|1|X|C|1609
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain Z
- Large ribosomal subunit protein uL2
Coloring options: