IL_8QPP_129

3D structure

PDB id

8QPP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAAG*UGAUG

Length

9 nucleotides

Bulged bases

8QPP|1|X|U|1570

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QPP_129 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.2529

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

8QPP|1|X|C|1515
8QPP|1|X|A|1516
8QPP|1|X|A|1517
8QPP|1|X|G|1518
*
8QPP|1|X|U|1567
8QPP|1|X|G|1568
8QPP|1|X|A|1569
8QPP|1|X|U|1570
8QPP|1|X|G|1571

Current chains

Chain X

23S ribosomal RNA

Nearby chains