IL_8QPP_145
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUAAG*UGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QPP_145 not in the Motif Atlas
- Homologous match to IL_7RQB_074
- Geometric discrepancy: 0.1878
- The information below is about IL_7RQB_074
- Detailed Annotation
- UAA/GAN with extra stack
- Broad Annotation
- No text annotation
- Motif group
- IL_90318.1
- Basepair signature
- cWW-tSH-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
8QPP|1|X|U|1880
8QPP|1|X|U|1881
8QPP|1|X|A|1882
8QPP|1|X|A|1883
8QPP|1|X|G|1884
*
8QPP|1|X|U|1916
8QPP|1|X|G|1917
8QPP|1|X|A|1918
8QPP|1|X|A|1919
8QPP|1|X|G|1920
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain Z
- Large ribosomal subunit protein uL2
Coloring options: