IL_8QPP_173
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 8QPP|1|X|G|2809
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QPP_173 not in the Motif Atlas
- Homologous match to IL_7RQB_102
- Geometric discrepancy: 0.1135
- The information below is about IL_7RQB_102
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.1
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
8QPP|1|X|U|2665
8QPP|1|X|U|2666
8QPP|1|X|G|2667
8QPP|1|X|A|2668
8QPP|1|X|G|2669
*
8QPP|1|X|C|2803
8QPP|1|X|A|2804
8QPP|1|X|A|2805
8QPP|1|X|G|2806
8QPP|1|X|A|2807
8QPP|1|X|U|2808
8QPP|1|X|G|2809
8QPP|1|X|A|2810
8QPP|1|X|G|2811
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain a
- Large ribosomal subunit protein uL3
- Chain e
- Large ribosomal subunit protein uL13
Coloring options: