IL_8QPP_174
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUAGUAC*GGACCG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QPP_174 not in the Motif Atlas
- Homologous match to IL_7A0S_094
- Geometric discrepancy: 0.1067
- The information below is about IL_7A0S_094
- Detailed Annotation
- Sarcin-Ricin target in LSU H95; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_16458.6
- Basepair signature
- cWW-L-R-L-R-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
8QPP|1|X|U|2681
8QPP|1|X|U|2682
8QPP|1|X|A|2683
8QPP|1|X|G|2684
8QPP|1|X|U|2685
8QPP|1|X|A|2686
8QPP|1|X|C|2687
*
8QPP|1|X|G|2692
8QPP|1|X|G|2693
8QPP|1|X|A|2694
8QPP|1|X|C|2695
8QPP|1|X|C|2696
8QPP|1|X|G|2697
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain d
- Large ribosomal subunit protein uL6
Coloring options: