IL_8QPP_192
3D structure
- PDB id
- 8QPP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Bacillus subtilis MutS2-collided disome complex (stalled 70S)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- ACGGGACGAACACCGAUAUGC*GAUUU
- Length
- 26 nucleotides
- Bulged bases
- 8QPP|1|X|A|61, 8QPP|1|X|C|62, 8QPP|1|X|U|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QPP_192 not in the Motif Atlas
- Geometric match to IL_5TBW_144
- Geometric discrepancy: 0.3607
- The information below is about IL_5TBW_144
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44998.1
- Basepair signature
- cWW-cWW-R-cWW-tSS-R-cWW-cWW-L-cWW-L-L-L-cWW-L-cSS-L-R-L-R
- Number of instances in this motif group
- 2
Unit IDs
8QPP|1|X|A|56
8QPP|1|X|C|57
8QPP|1|X|G|58
8QPP|1|X|G|59
8QPP|1|X|G|60
8QPP|1|X|A|61
8QPP|1|X|C|62
8QPP|1|X|G|63
8QPP|1|X|A|64
8QPP|1|X|A|65
8QPP|1|X|C|66
8QPP|1|X|A|67
8QPP|1|X|C|68
8QPP|1|X|C|69
8QPP|1|X|G|70
8QPP|1|X|A|71
8QPP|1|X|U|72
8QPP|1|X|A|73
8QPP|1|X|U|74
8QPP|1|X|G|75
8QPP|1|X|C|76
*
8QPP|1|X|G|109
8QPP|1|X|A|110
8QPP|1|X|U|111
8QPP|1|X|U|112
8QPP|1|X|U|113
Current chains
- Chain X
- 23S ribosomal RNA
Nearby chains
- Chain 2
- Large ribosomal subunit protein bL34
- Chain s
- Large ribosomal subunit protein uL23
- Chain w
- Large ribosomal subunit protein uL29
Coloring options: