IL_8QRK_025
3D structure
- PDB id
- 8QRK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mt-SSU assembly intermediate in GTPBP8 knock-out cells, state 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.69 Å
Loop
- Sequence
- AACACUACG*UAAAACU
- Length
- 16 nucleotides
- Bulged bases
- 8QRK|1|A|C|1143
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QRK|1|A|A|1139
8QRK|1|A|A|1140
8QRK|1|A|C|1141
8QRK|1|A|A|1142
8QRK|1|A|C|1143
8QRK|1|A|U|1144
8QRK|1|A|A|1145
8QRK|1|A|C|1146
8QRK|1|A|G|1147
*
8QRK|1|A|U|1158
8QRK|1|A|A|1159
8QRK|1|A|A|1160
8QRK|1|A|A|1161
8QRK|1|A|A|1162
8QRK|1|A|C|1163
8QRK|1|A|U|1164
Current chains
- Chain A
- 12S mitochondrial rRNA
Nearby chains
- Chain 3
- Aurora kinase A-interacting protein
- Chain J
- 28S ribosomal protein S12, mitochondrial
- Chain L
- 28S ribosomal protein S15, mitochondrial
Coloring options: