IL_8QSJ_030

3D structure

PDB id

8QSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACG*CUAU

Length

7 nucleotides

Bulged bases

8QSJ|1|A|C|2718, 8QSJ|1|A|U|3100, 8QSJ|1|A|A|3101

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QSJ_030 not in the Motif Atlas

Homologous match to IL_4WF9_079

Geometric discrepancy: 0.1336

The information below is about IL_4WF9_079

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_80025.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

8

Unit IDs

8QSJ|1|A|A|2717
8QSJ|1|A|C|2718
8QSJ|1|A|G|2719
*
8QSJ|1|A|C|3099
8QSJ|1|A|U|3100
8QSJ|1|A|A|3101
8QSJ|1|A|U|3102

Current chains

Chain A

16S rRNA

Nearby chains

Chain 0

39S ribosomal protein L32, mitochondrial

Chain E

39S ribosomal protein L3, mitochondrial

Chain T

39S ribosomal protein L22, mitochondrial