IL_8QSJ_032

3D structure

PDB id

8QSJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitoribosomal large subunit assembly intermediate 2 with GTPBP7

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

8QSJ|1|A|A|2926

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QSJ_032 not in the Motif Atlas

Homologous match to IL_7RQB_081

Geometric discrepancy: 0.0795

The information below is about IL_7RQB_081

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_42622.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

33

Unit IDs

8QSJ|1|A|G|2733
8QSJ|1|A|A|2734
*
8QSJ|1|A|U|2925
8QSJ|1|A|A|2926
8QSJ|1|A|C|2927
8QSJ|1|A|C|2928

Current chains

Chain A

16S rRNA

Nearby chains

Chain d

39S ribosomal protein L45, mitochondrial