IL_8QU1_033
3D structure
- PDB id
- 8QU1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.74 Å
Loop
- Sequence
- AUCUACAAUCAACCAAC*GUCAUU
- Length
- 23 nucleotides
- Bulged bases
- 8QU1|1|A|C|2393, 8QU1|1|A|A|2406
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QU1|1|A|A|2384
8QU1|1|A|U|2385
8QU1|1|A|C|2386
8QU1|1|A|U|2387
8QU1|1|A|A|2388
8QU1|1|A|C|2389
8QU1|1|A|A|2390
8QU1|1|A|A|2391
8QU1|1|A|U|2392
8QU1|1|A|C|2393
8QU1|1|A|A|2394
8QU1|1|A|A|2395
8QU1|1|A|C|2396
8QU1|1|A|C|2397
8QU1|1|A|A|2398
8QU1|1|A|A|2399
8QU1|1|A|C|2400
*
8QU1|1|A|G|2403
8QU1|1|A|U|2404
8QU1|1|A|C|2405
8QU1|1|A|A|2406
8QU1|1|A|U|2407
8QU1|1|A|U|2408
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 5
- 39S ribosomal protein L37, mitochondrial
- Chain D
- 39S ribosomal protein L2, mitochondrial
Coloring options: