IL_8QU5_027
3D structure
- PDB id
- 8QU5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- mt-LSU assembly intermediate in GTPBP8 knock-out cells, state 2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- GUACAUG*CGAACC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8QU5|1|A|G|2849
8QU5|1|A|U|2850
8QU5|1|A|A|2851
8QU5|1|A|C|2852
8QU5|1|A|A|2853
8QU5|1|A|U|2854
8QU5|1|A|G|2855
*
8QU5|1|A|C|2877
8QU5|1|A|G|2878
8QU5|1|A|A|2879
8QU5|1|A|A|2880
8QU5|1|A|C|2881
8QU5|1|A|C|2889
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain 1
- 39S ribosomal protein L33, mitochondrial
- Chain 3
- 39S ribosomal protein L35, mitochondrial
- Chain P
- 39S ribosomal protein L18, mitochondrial
- Chain W
- 39S ribosomal protein L27, mitochondrial
- Chain q
- Growth arrest and DNA damage-inducible proteins-interacting protein 1
Coloring options: