8QU5 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_8QU5_001 | No text annotation | ||
| HL_8QU5_002 | No text annotation | ||
| HL_8QU5_003 | GNRA | ||
| HL_8QU5_004 | No text annotation | ||
| HL_8QU5_005 | No text annotation | ||
| HL_8QU5_006 | No text annotation | ||
| HL_8QU5_007 | No text annotation | ||
| HL_8QU5_008 | No text annotation | ||
| HL_8QU5_009 | No text annotation | ||
| HL_8QU5_010 | GNRA | ||
| HL_8QU5_011 | No text annotation | ||
| HL_8QU5_012 | No text annotation | ||
| HL_8QU5_013 | GNRA with tandem sheared | ||
| HL_8QU5_014 | No text annotation | ||
| HL_8QU5_015 | No text annotation | ||
| HL_8QU5_016 | No text annotation | ||
| HL_8QU5_017 | Mini UNCG | ||
| HL_8QU5_018 | No text annotation | ||
| HL_8QU5_019 | No text annotation | ||
| HL_8QU5_020 | No text annotation | ||
| HL_8QU5_021 | No text annotation | ||
| HL_8QU5_022 | No text annotation | ||
| HL_8QU5_023 | No text annotation | ||
| HL_8QU5_024 | No text annotation | ||
| HL_8QU5_025 | GNRA | ||
| HL_8QU5_026 | No text annotation | ||
| HL_8QU5_027 | No text annotation | ||
| HL_8QU5_028 | No text annotation | ||
| HL_8QU5_029 | No text annotation | ||
| HL_8QU5_030 | tRNA D-loop | ||
| HL_8QU5_031 | Anticodon loop related |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_8QU5_001 | No text annotation | ||
| IL_8QU5_002 | Single bulged A | ||
| IL_8QU5_003 | 7x6 Sarcin-Ricin; G-bulge | ||
| IL_8QU5_004 | Isolated non-canonical cWW pair | ||
| IL_8QU5_005 | Isolated non-canonical cWW pair | ||
| IL_8QU5_006 | No text annotation | ||
| IL_8QU5_007 | Isolated non-canonical cWW pair | ||
| IL_8QU5_008 | tHW-tHW cross-strand stack | ||
| IL_8QU5_009 | Isolated non-canonical cWW pair | ||
| IL_8QU5_010 | No text annotation | ||
| IL_8QU5_011 | No text annotation | ||
| IL_8QU5_012 | Single bulged C | ||
| IL_8QU5_013 | UAA/GAN | ||
| IL_8QU5_014 | Isolated non-canonical cWW pair | ||
| IL_8QU5_015 | No text annotation | ||
| IL_8QU5_016 | No text annotation | ||
| IL_8QU5_017 | 8x7 Sarcin-Ricin; G-bulge | ||
| IL_8QU5_018 | No text annotation | ||
| IL_8QU5_034 | No text annotation | ||
| IL_8QU5_035 | No text annotation | ||
| IL_8QU5_036 | No text annotation | ||
| IL_8QU5_019 | No text annotation | ||
| IL_8QU5_020 | Isolated tWW turn | ||
| IL_8QU5_021 | Major groove platform; stack outside cWW | ||
| IL_8QU5_022 | Major groove platform with extra pair | ||
| IL_8QU5_023 | No text annotation | ||
| IL_8QU5_024 | Single bulged U | ||
| IL_8QU5_025 | Minor groove platform | ||
| IL_8QU5_026 | Minor groove platform | ||
| IL_8QU5_027 | No text annotation | ||
| IL_8QU5_028 | Double sheared with non-canonical cWW | ||
| IL_8QU5_029 | Isolated non-canonical cWW pair | ||
| IL_8QU5_030 | 8x7 Sarcin-Ricin; G-bulge | ||
| IL_8QU5_031 | C-loop | ||
| IL_8QU5_032 | Isolated non-canonical cWW pair | ||
| IL_8QU5_033 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| J3_8QU5_001 | No text annotation | ||
| J3_8QU5_002 | No text annotation | ||
| J3_8QU5_003 | No text annotation | ||
| J3_8QU5_004 | No text annotation | ||
| J4_8QU5_001 | No text annotation | ||
| J4_8QU5_002 | No text annotation | ||
| J5_8QU5_001 | No text annotation | ||
| J5_8QU5_002 | No text annotation | ||
| J5_8QU5_003 | No text annotation | ||
| J6_8QU5_001 | No text annotation | ||
| J6_8QU5_002 | No text annotation |
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