IL_8QYX_009
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- AU*ACAUGU
- Length
- 8 nucleotides
- Bulged bases
- 8QYX|1|A2|U|150
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QYX_009 not in the Motif Atlas
- Homologous match to IL_8C3A_007
- Geometric discrepancy: 0.1372
- The information below is about IL_8C3A_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_19724.3
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
8QYX|1|A2|A|121
8QYX|1|A2|U|122
*
8QYX|1|A2|A|147
8QYX|1|A2|C|148
8QYX|1|A2|A|149
8QYX|1|A2|U|150
8QYX|1|A2|G|151
8QYX|1|A2|U|152
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain B1
- 60S ribosomal protein L7a
- Chain C2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain H1
- 60S ribosomal protein L15
Coloring options: