IL_8QYX_013

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

CGGCGCC*GCGCCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QYX|1|A2|C|175
8QYX|1|A2|G|176
8QYX|1|A2|G|177
8QYX|1|A2|C|178
8QYX|1|A2|G|179
8QYX|1|A2|C|180
8QYX|1|A2|C|181
*
8QYX|1|A2|G|256
8QYX|1|A2|C|257
8QYX|1|A2|G|258
8QYX|1|A2|C|259
8QYX|1|A2|C|260
8QYX|1|A2|G|261

Current chains

Chain A2

28S rRNA

Nearby chains

Chain F1

60S ribosomal protein L13

Chain b1

60S ribosomal protein L35