IL_8QYX_025

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

GAUUCAAC*GCGCAUUUC

Length

17 nucleotides

Bulged bases

8QYX|1|A2|U|467, 8QYX|1|A2|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QYX|1|A2|G|465
8QYX|1|A2|A|466
8QYX|1|A2|U|467
8QYX|1|A2|U|468
8QYX|1|A2|C|469
8QYX|1|A2|A|470
8QYX|1|A2|A|471
8QYX|1|A2|C|472
*
8QYX|1|A2|G|682
8QYX|1|A2|C|683
8QYX|1|A2|G|684
8QYX|1|A2|C|685
8QYX|1|A2|A|686
8QYX|1|A2|U|687
8QYX|1|A2|U|688
8QYX|1|A2|U|689
8QYX|1|A2|C|690

Current chains

Chain A2

28S rRNA

Nearby chains

Chain H2

60S ribosomal protein L6

Chain k1

60S ribosomal protein L28