IL_8QYX_035
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- AAGG*CAGCAGCACU
- Length
- 14 nucleotides
- Bulged bases
- 8QYX|1|A2|A|932, 8QYX|1|A2|C|934, 8QYX|1|A2|A|935, 8QYX|1|A2|C|936
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QYX_035 not in the Motif Atlas
- Homologous match to IL_8GLP_037
- Geometric discrepancy: 0.0966
- The information below is about IL_8GLP_037
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_70469.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8QYX|1|A2|A|732
8QYX|1|A2|A|733
8QYX|1|A2|G|734
8QYX|1|A2|G|735
*
8QYX|1|A2|C|928
8QYX|1|A2|A|929
8QYX|1|A2|G|930
8QYX|1|A2|C|931
8QYX|1|A2|A|932
8QYX|1|A2|G|933
8QYX|1|A2|C|934
8QYX|1|A2|A|935
8QYX|1|A2|C|936
8QYX|1|A2|U|937
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain F2
- 60S ribosomal protein L4
- Chain G1
- 60S ribosomal protein L14
- Chain M1
- 60S ribosomal protein L18a
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