IL_8QYX_044

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

8QYX|1|A2|G|1359, 8QYX|1|A2|C|1378

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QYX|1|A2|C|1357
8QYX|1|A2|G|1358
8QYX|1|A2|G|1359
8QYX|1|A2|G|1360
8QYX|1|A2|G|1361
*
8QYX|1|A2|C|1376
8QYX|1|A2|G|1377
8QYX|1|A2|C|1378
8QYX|1|A2|C|1379
8QYX|1|A2|G|1380
8QYX|1|A2|U|1381
8QYX|1|A2|G|1382

Current chains

Chain A2

28S rRNA

Nearby chains

Chain F1

60S ribosomal protein L13

Chain F2

60S ribosomal protein L4

Chain H1

60S ribosomal protein L15

Chain U1

Large ribosomal subunit protein uL15