3D structure

PDB id
8QYX (explore in PDB, NAKB, or RNA 3D Hub)
Description
Human 60S ribosomal subunit
Experimental method
ELECTRON MICROSCOPY
Resolution
1.78 Å

Loop

Sequence
CCG*CG
Length
5 nucleotides
Bulged bases
8QYX|1|A2|C|1921
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8QYX|1|A2|C|1920
8QYX|1|A2|C|1921
8QYX|1|A2|G|1922
*
8QYX|1|A2|C|2062
8QYX|1|A2|G|2063

Current chains

Chain A2
28S rRNA

Nearby chains

Chain A1
Large ribosomal subunit protein uL30
Chain B2
5S ribosomal RNA; 5S rRNA
Chain G1
60S ribosomal protein L14
Chain I1
60S ribosomal protein L13a
Chain M1
60S ribosomal protein L18a
Chain Z1
60S ribosomal protein L35a

Coloring options:

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