IL_8QYX_077

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

UAUAGACAGCAGG*CUGCCGAA

Length

21 nucleotides

Bulged bases

8QYX|1|A2|A|1960

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QYX|1|A2|U|1957
8QYX|1|A2|A|1958
8QYX|1|A2|U|1959
8QYX|1|A2|A|1960
8QYX|1|A2|G|1961
8QYX|1|A2|A|1962
8QYX|1|A2|C|1963
8QYX|1|A2|A|1964
8QYX|1|A2|G|1965
8QYX|1|A2|C|1966
8QYX|1|A2|A|1967
8QYX|1|A2|G|1968
8QYX|1|A2|G|1969
*
8QYX|1|A2|C|2019
8QYX|1|A2|U|2020
8QYX|1|A2|G|2021
8QYX|1|A2|C|2022
8QYX|1|A2|C|2023
8QYX|1|A2|G|2024
8QYX|1|A2|A|2025
8QYX|1|A2|A|2026

Current chains

Chain A2

28S rRNA

Nearby chains

Chain C1

60S ribosomal protein L9

Chain M1

60S ribosomal protein L18a

Chain g1

Large ribosomal subunit protein eL40