IL_8QYX_143
3D structure
- PDB id
- 8QYX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human 60S ribosomal subunit
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 1.78 Å
Loop
- Sequence
- AUC*(OMG)U(OMU)
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMG, OMU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8QYX_143 not in the Motif Atlas
- Homologous match to IL_8P9A_343
- Geometric discrepancy: 0.0923
- The information below is about IL_8P9A_343
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_71625.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
8QYX|1|A2|A|4590
8QYX|1|A2|U|4591
8QYX|1|A2|C|4592
*
8QYX|1|A2|OMG|4618
8QYX|1|A2|U|4619
8QYX|1|A2|OMU|4620
Current chains
- Chain A2
- 28S rRNA
Nearby chains
- Chain E2
- Large ribosomal subunit protein uL3
- Chain P1
- 60S ribosomal protein L23
Coloring options: