IL_8QYX_157

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

GCG*CC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8QYX_157 not in the Motif Atlas

Geometric match to IL_8C3A_400

Geometric discrepancy: 0.2078

The information below is about IL_8C3A_400

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.2

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

8QYX|1|A2|G|4899
8QYX|1|A2|C|4900
8QYX|1|A2|G|4901
*
8QYX|1|A2|C|4920
8QYX|1|A2|C|4921

Current chains

Chain A2

28S rRNA

Nearby chains