IL_8QYX_162

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

8QYX|1|A2|G|5041

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QYX|1|A2|U|5003
8QYX|1|A2|C|5004
8QYX|1|A2|G|5005
8QYX|1|A2|U|5006
8QYX|1|A2|A|5007
8QYX|1|A2|C|5008
8QYX|1|A2|G|5009
*
8QYX|1|A2|U|5039
8QYX|1|A2|U|5040
8QYX|1|A2|G|5041
8QYX|1|A2|A|5042
8QYX|1|A2|A|5043
8QYX|1|A2|A|5044

Current chains

Chain A2

28S rRNA

Nearby chains

Chain E2

Large ribosomal subunit protein uL3

Chain Q1

60S ribosomal protein L24

Chain X1

60S ribosomal protein L31