IL_8QYX_173

3D structure

PDB id

8QYX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human 60S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

1.78 Å

Loop

Sequence

GGGUC*GGCGCCUAGC

Length

15 nucleotides

Bulged bases

8QYX|1|A2|G|2902, 8QYX|1|A2|U|2904, 8QYX|1|A2|G|3590, 8QYX|1|A2|A|3596

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8QYX|1|A2|G|2901
8QYX|1|A2|G|2902
8QYX|1|A2|G|2903
8QYX|1|A2|U|2904
8QYX|1|A2|C|2905
*
8QYX|1|A2|G|3589
8QYX|1|A2|G|3590
8QYX|1|A2|C|3591
8QYX|1|A2|G|3592
8QYX|1|A2|C|3593
8QYX|1|A2|C|3594
8QYX|1|A2|U|3595
8QYX|1|A2|A|3596
8QYX|1|A2|G|3597
8QYX|1|A2|C|3598

Current chains

Chain A2

28S rRNA

Nearby chains

Chain L1

60S ribosomal protein L19