IL_8R3V_012

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GAAC*GAGUGAAAAAGAAC

Length

18 nucleotides

Bulged bases

8R3V|1|72|A|504, 8R3V|1|72|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_012 not in the Motif Atlas

Homologous match to IL_5J7L_255

Geometric discrepancy: 0.0614

The information below is about IL_5J7L_255

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_81516.2

Basepair signature

cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L

Number of instances in this motif group

6

Unit IDs

8R3V|1|72|G|481
8R3V|1|72|A|482
8R3V|1|72|A|483
8R3V|1|72|C|484
*
8R3V|1|72|G|496
8R3V|1|72|A|497
8R3V|1|72|G|498
8R3V|1|72|U|499
8R3V|1|72|G|500
8R3V|1|72|A|501
8R3V|1|72|A|502
8R3V|1|72|A|503
8R3V|1|72|A|504
8R3V|1|72|A|505
8R3V|1|72|G|506
8R3V|1|72|A|507
8R3V|1|72|A|508
8R3V|1|72|C|509

Current chains

Chain 72

23S ribosomal RNA

Nearby chains