IL_8R3V_019

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_019 not in the Motif Atlas

Homologous match to IL_4WF9_024

Geometric discrepancy: 0.0807

The information below is about IL_4WF9_024

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

8R3V|1|72|U|703
8R3V|1|72|G|704
8R3V|1|72|A|705
8R3V|1|72|A|706
8R3V|1|72|G|707
*
8R3V|1|72|U|724
8R3V|1|72|G|725
8R3V|1|72|G|726
8R3V|1|72|A|727
8R3V|1|72|G|728

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain b2

50S ribosomal protein L2