IL_8R3V_035

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UUAAGUG*CUAAA

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_035 not in the Motif Atlas

Geometric match to IL_4WF9_039

Geometric discrepancy: 0.1525

The information below is about IL_4WF9_039

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_57188.5

Basepair signature

cWW-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

5

Unit IDs

8R3V|1|72|U|1018
8R3V|1|72|U|1019
8R3V|1|72|A|1020
8R3V|1|72|A|1021
8R3V|1|72|G|1022
8R3V|1|72|U|1023
8R3V|1|72|G|1024
*
8R3V|1|72|C|1140
8R3V|1|72|U|1141
8R3V|1|72|A|1142
8R3V|1|72|A|1143
8R3V|1|72|A|1144

Current chains

Chain 72

23S ribosomal RNA

Nearby chains