IL_8R3V_089

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CGAG*CGAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_089 not in the Motif Atlas

Homologous match to IL_5J7L_333

Geometric discrepancy: 0.0738

The information below is about IL_5J7L_333

Detailed Annotation

Double sheared

Broad Annotation

Double sheared

Motif group

IL_09705.15

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

34

Unit IDs

8R3V|1|72|C|2350
8R3V|1|72|G|2351
8R3V|1|72|A|2352
8R3V|1|72|G|2353
*
8R3V|1|72|C|2364
8R3V|1|72|G|2365
8R3V|1|72|A|2366
8R3V|1|72|G|2367

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain 62

50S ribosomal protein L35

Chain r2

50S ribosomal protein L18

Chain z2

50S ribosomal protein L27