IL_8R3V_097

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

CUC*GCGAG

Length

8 nucleotides

Bulged bases

8R3V|1|72|G|2576, 8R3V|1|72|A|2577

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_097 not in the Motif Atlas

Geometric match to IL_4WF9_095

Geometric discrepancy: 0.0829

The information below is about IL_4WF9_095

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

8R3V|1|72|C|2510
8R3V|1|72|U|2511
8R3V|1|72|C|2512
*
8R3V|1|72|G|2574
8R3V|1|72|C|2575
8R3V|1|72|G|2576
8R3V|1|72|A|2577
8R3V|1|72|G|2578

Current chains

Chain 72

23S ribosomal RNA

Nearby chains

Chain p

Nascent chain