IL_8R3V_134

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

UGG*CUGA

Length

7 nucleotides

Bulged bases

8R3V|1|A1|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_134 not in the Motif Atlas

Homologous match to IL_6CZR_128

Geometric discrepancy: 0.366

The information below is about IL_6CZR_128

Detailed Annotation

Single bulged G, near cWW

Broad Annotation

Single bulged G, near cWW

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

8R3V|1|A1|U|375
8R3V|1|A1|G|376
8R3V|1|A1|G|377
*
8R3V|1|A1|C|386
8R3V|1|A1|U|387
8R3V|1|A1|G|388
8R3V|1|A1|A|389

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain P1

30S ribosomal protein S16

Chain i2

50S ribosomal protein L9