IL_8R3V_140
3D structure
- PDB id
- 8R3V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (non-rotated disome interface)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- CGGCUAAC*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R3V_140 not in the Motif Atlas
- Homologous match to IL_5J7L_024
- Geometric discrepancy: 0.0895
- The information below is about IL_5J7L_024
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_41203.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 11
Unit IDs
8R3V|1|A1|C|504
8R3V|1|A1|G|505
8R3V|1|A1|G|506
8R3V|1|A1|C|507
8R3V|1|A1|U|508
8R3V|1|A1|A|509
8R3V|1|A1|A|510
8R3V|1|A1|C|511
*
8R3V|1|A1|G|540
8R3V|1|A1|G|541
Current chains
- Chain A1
- 16S ribosomal RNA
Nearby chains
- Chain D1
- Small ribosomal subunit protein uS4
- Chain L1
- Small ribosomal subunit protein uS12
Coloring options: