IL_8R3V_144

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GUU*GGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_144 not in the Motif Atlas

Geometric match to IL_5AY2_003

Geometric discrepancy: 0.1993

The information below is about IL_5AY2_003

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

8R3V|1|A1|G|592
8R3V|1|A1|U|593
8R3V|1|A1|U|594
*
8R3V|1|A1|G|645
8R3V|1|A1|G|646
8R3V|1|A1|C|647

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain H1

Small ribosomal subunit protein uS8

Chain O1

30S ribosomal protein S15

Chain Q1

Small ribosomal subunit protein uS17