IL_8R3V_165

3D structure

PDB id

8R3V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli paused disome complex (non-rotated disome interface)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.28 Å

Loop

Sequence

GCU*G(2MG)C

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8R3V_165 not in the Motif Atlas

Homologous match to IL_6CZR_153

Geometric discrepancy: 0.274

The information below is about IL_6CZR_153

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8R3V|1|A1|G|1050
8R3V|1|A1|C|1051
8R3V|1|A1|U|1052
*
8R3V|1|A1|G|1206
8R3V|1|A1|2MG|1207
8R3V|1|A1|C|1208

Current chains

Chain A1

16S ribosomal RNA

Nearby chains

Chain C1

Small ribosomal subunit protein uS3

Chain N1

Small ribosomal subunit protein uS14

Chain Y1

Transfer RNA; tRNA