IL_8R3V_180
3D structure
- PDB id
- 8R3V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli paused disome complex (non-rotated disome interface)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.28 Å
Loop
- Sequence
- GU(5MC)AC*GAAGUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8R3V_180 not in the Motif Atlas
- Homologous match to IL_4LFB_058
- Geometric discrepancy: 0.2605
- The information below is about IL_4LFB_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8R3V|1|A1|G|1405
8R3V|1|A1|U|1406
8R3V|1|A1|5MC|1407
8R3V|1|A1|A|1408
8R3V|1|A1|C|1409
*
8R3V|1|A1|G|1491
8R3V|1|A1|A|1492
8R3V|1|A1|A|1493
8R3V|1|A1|G|1494
8R3V|1|A1|U|1495
8R3V|1|A1|C|1496
Current chains
- Chain A1
- 16S ribosomal RNA
Nearby chains
- Chain 71
- Large subunit ribosomal RNA; LSU rRNA
- Chain L1
- Small ribosomal subunit protein uS12
- Chain V2
- messenger RNA
- Chain Y1
- Transfer RNA; tRNA
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